monocle2
https://cole-trapnell-lab.github.io/monocle3/
Code
if(!require(monocle)) BiocManager::install("monocle")
#> package 'graph' successfully unpacked and MD5 sums checked
#> package 'RBGL' successfully unpacked and MD5 sums checked
#> package 'RUnit' successfully unpacked and MD5 sums checked
#> package 'VGAM' successfully unpacked and MD5 sums checked
#> package 'DDRTree' successfully unpacked and MD5 sums checked
#> package 'combinat' successfully unpacked and MD5 sums checked
#> package 'fastICA' successfully unpacked and MD5 sums checked
#> package 'leidenbase' successfully unpacked and MD5 sums checked
#> package 'slam' successfully unpacked and MD5 sums checked
#> package 'biocViews' successfully unpacked and MD5 sums checked
#> package 'RANN' successfully unpacked and MD5 sums checked
#> package 'monocle' successfully unpacked and MD5 sums checked
#>
#> The downloaded binary packages are in
#> C:\Users\WANGANLIN\AppData\Local\Temp\RtmpwXCpHn\downloaded_packages
https://lishensuo.github.io/posts/bioinfo/单细胞monocle轨迹分析
https://www.jianshu.com/p/c402b6588e17